ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 326720.00 94.28 596.38 99.13 SNORD59A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 240.00 43.17 0.44 100.0 SNORA7B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 1684.00 93.14 3.07 100.0 SNORD14D-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 77.00 10.34 0.14 100.0 Y_RNA.555-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 6385.00 92.02 11.65 93.43 MIR25-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 27596.00 92.95 50.37 96.46 MIR99B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 11091.00 57.37 20.24 83.58 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 7498.00 38.78 13.69 86.1 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 31033.00 88.19 56.65 100.0 MIR203A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 873.00 8.86 1.59 100.0 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 7667.00 77.77 13.99 88.56 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1500.00 89.45 2.74 100.0 MIR30B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 467.00 94.34 0.85 100.0 MIR181D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 12.00 92.31 0.02 100.0 MIR215-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 266.00 0.46 0.49 100.0 MIR181A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 57280.00 98.22 104.56 99.38 MIR191-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 224.00 68.71 0.41 77.24 MIR149-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1383.00 90.39 2.52 98.36 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 70.00 4.58 0.13 100.0 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 19.00 67.86 0.03 100.0 MIR194-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 427.00 86.09 0.78 86.97 MIR128-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 4139.00 81.73 7.56 89.3 MIR99A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 691.00 0.76 1.26 100.0 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 81898.00 89.88 149.49 94.19 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 2161.00 2.37 3.94 83.99 MIR28-201 miRNA esophagus squamous epithelium (Tissue)