ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 496.00 6.28 0.91 83.5 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 90.00 81.82 0.16 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 50.00 15.82 0.09 87.72 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 16.00 84.21 0.03 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 41.00 0.43 0.07 13.49 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 263.00 2.79 0.48 86.51 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 2703.00 28.67 4.93 78.85 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 276.75 24.21 0.51 69.19 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 71.00 6.21 0.13 73.2 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 127.89 11.19 0.23 33.48 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 10065.00 89.47 18.37 95.75 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 3.00 0.08 0.01 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 520.00 10.42 0.95 68.6 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 91.00 0.44 0.17 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 432.00 1.57 0.79 89.44 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 56.00 16.42 0.10 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 219.00 9.06 0.40 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 20234.00 93.15 36.93 99.73 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 5.00 0.11 0.01 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 697.00 15.39 1.27 78.85 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 9.00 6.08 0.02 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 22.00 9.82 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 16.00 2.88 0.03 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 1544.00 84.14 2.82 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 117.00 90.70 0.21 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA esophagus squamous epithelium (Tissue)