ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 3074.00 92.04 5.61 100.0 SNHG17-252 lncRNA esophagus squamous epithelium (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 1122.00 18.24 2.05 74.01 SNHG14-288 lncRNA esophagus squamous epithelium (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 4585.00 74.54 8.37 92.59 SNHG14-288 lncRNA esophagus squamous epithelium (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 5.00 3.42 0.01 100.0 SNHG14-295 lncRNA esophagus squamous epithelium (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 353.00 66.73 0.64 100.0 MEG8-240 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 2841.00 59.41 5.19 100.0 SNHG14-303 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 46.00 12.85 0.08 100.0 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 2.00 0.56 0.00 100.0 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 227.00 63.41 0.41 98.27 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 109.00 4.20 0.20 100.0 ENST00000666735 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 20.00 0.77 0.04 100.0 ENST00000666735 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 786.00 84.61 1.43 100.0 MEG8-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 1249.87 23.28 2.28 26.97 SNHG14-312 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 3231.40 60.20 5.90 69.72 SNHG14-312 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 71.00 0.10 0.13 100.0 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 177.00 0.26 0.32 100.0 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 67254.00 98.72 122.76 99.62 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1586.00 0.04 2.90 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 23.00 0.00 0.04 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 5070.00 0.12 9.25 98.22 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2411.34 0.06 4.40 61.26 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1964.00 0.05 3.58 83.54 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 2423189.00 57.40 4423.18 99.69 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 590.00 0.01 1.08 66.52 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 42038.00 1.00 76.73 99.41 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)