ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 46.00 0.53 0.20 66.67 LINC01962-202 lncRNA ovary (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 7757.00 89.67 34.15 100.0 LINC01962-202 lncRNA ovary (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 81.00 0.94 0.36 100.0 LINC01962-202 lncRNA ovary (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 8294.00 53.75 36.52 92.55 SNHG14-241 lncRNA ovary (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 11642.00 83.98 51.26 100.0 MEG8-228 lncRNA ovary (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 4574.00 47.39 20.14 100.0 SNHG14-254 lncRNA ovary (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 999.00 10.89 4.40 100.0 SNHG14-261 lncRNA ovary (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 3817.00 41.59 16.81 83.25 SNHG14-261 lncRNA ovary (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 39.00 1.23 0.17 100.0 LIMD1-AS1-204 lncRNA ovary (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 40.00 1.26 0.18 100.0 LIMD1-AS1-204 lncRNA ovary (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 585.00 18.40 2.58 96.53 LIMD1-AS1-204 lncRNA ovary (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 20901.00 62.09 92.02 85.76 MIR99AHG-262 lncRNA ovary (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 5027.00 14.93 22.13 100.0 MIR99AHG-262 lncRNA ovary (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 4.00 4.49 0.02 100.0 SNHG14-266 lncRNA ovary (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 342.00 73.55 1.51 100.0 SNHG14-270 lncRNA ovary (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 491.00 2.51 2.16 100.0 SNHG14-275 lncRNA ovary (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 232.00 85.93 1.02 90.62 MIR9-2HG-225 lncRNA ovary (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 3187.00 60.05 14.03 100.0 MEG8-233 lncRNA ovary (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 369.00 6.95 1.62 100.0 MEG8-233 lncRNA ovary (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 4111.00 6.02 18.10 100.0 SNHG14-278 lncRNA ovary (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 52042.00 76.18 229.13 92.5 SNHG14-278 lncRNA ovary (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 1657.00 33.12 7.30 100.0 MEG8-234 lncRNA ovary (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 769.00 15.37 3.39 100.0 MEG8-234 lncRNA ovary (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1768.00 90.30 7.78 100.0 SNHG17-252 lncRNA ovary (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 3066.00 8.21 13.50 63.93 SNHG14-288 lncRNA ovary (Tissue)