ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 594.00 0.07 2.62 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 2702.00 0.31 11.90 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 16996.00 1.93 74.83 85.84 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 10925.00 1.24 48.10 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 2754.00 0.31 12.13 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 2843.00 0.32 12.52 93.24 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 19692.00 2.23 86.70 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 449.00 0.05 1.98 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 2341.00 0.27 10.31 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 173084.00 19.64 762.04 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 182.00 0.02 0.80 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 39.00 6.49 0.17 100.0 FTX-219 lncRNA ovary (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 187.00 31.11 0.82 93.97 FTX-219 lncRNA ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 81.00 1.98 0.36 20.2 CTC1-214 protein coding ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 76.00 1.86 0.33 75.25 CTC1-214 protein coding ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 2025.00 49.43 8.92 87.32 CTC1-214 protein coding ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 320.00 7.81 1.41 79.8 CTC1-214 protein coding ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 607.00 14.82 2.67 56.31 CTC1-214 protein coding ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 122.00 2.98 0.54 100.0 CTC1-214 protein coding ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 135.00 3.30 0.59 100.0 CTC1-214 protein coding ovary (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 50.00 1.22 0.22 100.0 CTC1-214 protein coding ovary (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 404.00 1.48 1.78 67.67 ENST00000651540 lncRNA ovary (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1720.00 6.30 7.57 89.35 ENST00000651540 lncRNA ovary (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 74.00 0.27 0.33 100.0 ENST00000651540 lncRNA ovary (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 935.00 3.42 4.12 53.98 ENST00000651540 lncRNA ovary (Tissue)