ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 446.00 1.89 1.96 100.0 RPL4-202 retained intron ovary (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 1.00 0.00 0.00 100.0 ENST00000563103 lncRNA ovary (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 2663.00 42.79 11.72 100.0 RPL4-207 retained intron ovary (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 893.00 14.35 3.93 100.0 RPL4-207 retained intron ovary (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 6615.00 79.39 29.12 96.37 ENST00000565336 lncRNA ovary (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 768.00 9.22 3.38 74.2 ENST00000565336 lncRNA ovary (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 7232.00 0.73 31.84 100.0 RBMX-210 retained intron ovary (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 783.00 0.08 3.45 100.0 RBMX-210 retained intron ovary (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 8488.00 0.86 37.37 100.0 RBMX-210 retained intron ovary (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 639132.00 64.76 2813.90 67.07 RBMX-210 retained intron ovary (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 51.00 1.95 0.22 100.0 RPL4-214 retained intron ovary (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 1683.00 64.41 7.41 100.0 RPL4-214 retained intron ovary (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 2309.74 46.13 10.17 77.07 POLG-DT-202 lncRNA ovary (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 1324.10 26.45 5.83 41.46 POLG-DT-202 lncRNA ovary (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 77.00 1.54 0.34 100.0 POLG-DT-202 lncRNA ovary (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 398.00 33.25 1.75 100.0 ENST00000570843 lncRNA ovary (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 2446.00 78.27 10.77 100.0 MIR497HG-207 lncRNA ovary (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 6380.00 95.22 28.09 97.76 MIR22HG-212 lncRNA ovary (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 465.00 1.33 2.05 40.09 SNORD53B-201 snoRNA ovary (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 32055.00 91.46 141.13 95.97 SNORD53B-201 snoRNA ovary (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 695.00 1.98 3.06 59.91 SNORD53B-201 snoRNA ovary (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 57.00 83.82 0.25 100.0 ENST00000578036 lncRNA ovary (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 405.00 78.03 1.78 100.0 RPL23A-207 protein coding ovary (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 249.00 90.88 1.10 100.0 MIR744-201 miRNA ovary (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 19.00 41.30 0.08 100.0 MIR378C-201 miRNA ovary (Tissue)