ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 329.00 0.08 1.45 100.0 SNORD71-201 snoRNA ovary (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 394808.00 98.75 1738.22 99.93 SNORD71-201 snoRNA ovary (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 4941.00 85.38 21.75 93.99 MIR194-2HG-201 lncRNA ovary (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 794.00 13.72 3.50 52.34 MIR194-2HG-201 lncRNA ovary (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 4.00 0.33 0.02 100.0 LINC01783-201 lncRNA ovary (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1297.00 21.07 5.71 77.99 SNORD62B-201 snoRNA ovary (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 667.00 10.84 2.94 100.0 SNORD62B-201 snoRNA ovary (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 17.00 0.28 0.07 100.0 SNORD62B-201 snoRNA ovary (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 187.00 3.04 0.82 100.0 SNORD62B-201 snoRNA ovary (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 1080.00 17.55 4.75 100.0 SNORD62B-201 snoRNA ovary (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 22.00 81.48 0.10 100.0 MRPL32-203 nonsense mediated decay ovary (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 24.00 96.00 0.11 100.0 ENST00000436739 lncRNA ovary (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 1891.00 33.01 8.33 90.31 TMEM107-204 protein coding ovary (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 2.00 0.03 0.01 100.0 TMEM107-204 protein coding ovary (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 130.00 2.27 0.57 100.0 TMEM107-204 protein coding ovary (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 221.00 3.86 0.97 100.0 TMEM107-204 protein coding ovary (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1674.00 29.22 7.37 81.34 TMEM107-204 protein coding ovary (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 144.00 7.75 0.63 100.0 SNHG16-201 lncRNA ovary (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 909.00 48.90 4.00 96.91 SNHG16-201 lncRNA ovary (Tissue)
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 22.00 22.22 0.10 100.0 SNHG14-207 lncRNA ovary (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 21741.00 77.11 95.72 94.04 SNORD105B-201 snoRNA ovary (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 143.00 26.09 0.63 44.97 SNORD121B-201 snoRNA ovary (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 69.00 0.05 0.30 100.0 SNORD127-201 snoRNA ovary (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 127376.00 97.48 560.80 99.12 SNORD127-201 snoRNA ovary (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 7328.00 94.15 32.26 100.0 SNORD42B-201 snoRNA ovary (Tissue)