ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 106.00 0.42 0.47 100.0 B4GALNT2-202 protein coding ovary (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 106.00 81.54 0.47 100.0 NDE1-202 protein coding ovary (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 64.00 92.75 0.28 100.0 MIR450B-201 miRNA ovary (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 52.00 32.70 0.23 100.0 MIR887-201 miRNA ovary (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 64.00 82.05 0.28 100.0 MIR889-201 miRNA ovary (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 2672.00 52.20 11.76 100.0 SNORD111-201 snoRNA ovary (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 475.00 60.20 2.09 79.56 SNORD88A-201 snoRNA ovary (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 4.00 66.67 0.02 100.0 MIR548K-201 miRNA ovary (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 504.00 55.20 2.22 100.0 MIR320B2-201 miRNA ovary (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 144.00 92.31 0.63 100.0 MIR1271-201 miRNA ovary (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 862.00 7.74 3.80 100.0 SNORD100-201 snoRNA ovary (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 121.00 1.09 0.53 100.0 SNORD100-201 snoRNA ovary (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 7210.00 64.76 31.74 100.0 SNORD100-201 snoRNA ovary (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1841.00 16.53 8.11 100.0 SNORD100-201 snoRNA ovary (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3994.00 73.74 17.58 100.0 SNORD111B-201 snoRNA ovary (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 593.00 5.34 2.61 100.0 RNU2-36P-201 snRNA ovary (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 362.00 3.26 1.59 100.0 RNU2-36P-201 snRNA ovary (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 2171.00 3.93 9.56 100.0 SNORD19C-201 snoRNA ovary (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 51432.00 93.06 226.44 99.2 SNORD19C-201 snoRNA ovary (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1381.00 4.70 6.08 100.0 SNORD12B-201 snoRNA ovary (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 80.00 0.27 0.35 100.0 SNORD12B-201 snoRNA ovary (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 25506.00 86.76 112.30 95.36 SNORD12B-201 snoRNA ovary (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 1.00 0.44 0.00 100.0 Y_RNA.609-201 misc RNA ovary (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 15.00 31.25 0.07 100.0 Y_RNA.612-201 misc RNA ovary (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 394808.00 98.75 1738.22 99.93 SNORD71-201 snoRNA ovary (Tissue)