ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 60.00 89.55 0.26 100.0 MIR454-201 miRNA ovary (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 691.00 75.35 3.04 100.0 MIR501-201 miRNA ovary (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 396.00 86.46 1.74 100.0 MIR769-201 miRNA ovary (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 90.00 72.58 0.40 100.0 KRTAP19-1-201 protein coding ovary (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 42.00 11.08 0.18 100.0 MIR708-201 miRNA ovary (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 11810.00 87.62 52.00 100.0 MIR509-3-201 miRNA ovary (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 6.00 100.00 0.03 100.0 MIR301B-201 miRNA ovary (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 379.00 50.33 1.67 78.63 RNU1-82P-201 snRNA ovary (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 810.00 4.23 3.57 100.0 SNORD66-201 snoRNA ovary (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 214.00 1.12 0.94 100.0 SNORD66-201 snoRNA ovary (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 8102.00 42.29 35.67 70.51 SNORD66-201 snoRNA ovary (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 730.00 3.81 3.21 100.0 SNORD66-201 snoRNA ovary (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 3.00 27.27 0.01 100.0 U3.17-201 snoRNA ovary (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 4157.00 93.04 18.30 100.0 SNORD17-201 snoRNA ovary (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 212.00 67.73 0.93 100.0 SNORD72-201 snoRNA ovary (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 521.00 67.23 2.29 100.0 SNORD70B-201 snoRNA ovary (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 1536.00 72.11 6.76 92.87 RNY4P18-201 misc RNA ovary (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 24643.00 88.62 108.50 100.0 SNORD90-201 snoRNA ovary (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 1568.00 5.64 6.90 54.39 SNORD90-201 snoRNA ovary (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 16572.00 34.24 72.96 100.0 SNORD69-201 snoRNA ovary (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 12596.00 26.03 55.46 100.0 SNORD69-201 snoRNA ovary (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 11231.00 23.21 49.45 100.0 SNORD69-201 snoRNA ovary (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1580.00 3.26 6.96 100.0 SNORD69-201 snoRNA ovary (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 721.00 50.92 3.17 58.0 SNORD70-201 snoRNA ovary (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 20846.00 83.45 91.78 92.5 B4GALNT2-202 protein coding ovary (Tissue)