ENCFF073SVL

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR316SXP
Description: Part of ENCODE experiment ENCSR316SXP. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 451.00 0.26 2.16 100.0 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 162833.00 95.64 780.67 99.71 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 77530.00 97.96 371.70 100.0 SNORD37-201 snoRNA transverse colon (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 357817.00 91.38 1715.48 98.52 SNORD59A-201 snoRNA transverse colon (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 30.00 5.49 0.14 100.0 SNORA7B-201 snoRNA transverse colon (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 1121.00 79.56 5.37 100.0 SNORD14D-201 snoRNA transverse colon (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 33.00 17.28 0.16 100.0 Y_RNA.555-201 misc RNA transverse colon (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 3791.00 88.02 18.18 90.24 MIR25-201 miRNA transverse colon (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 3960.00 91.58 18.99 95.33 MIR99B-201 miRNA transverse colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 1839.00 39.88 8.82 79.13 MIR23B-201 miRNA transverse colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 2561.00 55.54 12.28 71.82 MIR23B-201 miRNA transverse colon (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 1091.00 79.17 5.23 100.0 MIR203A-201 miRNA transverse colon (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 179.00 3.89 0.86 100.0 MIR199B-201 miRNA transverse colon (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 3722.00 80.98 17.84 86.16 MIR199B-201 miRNA transverse colon (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 967.00 95.27 4.64 100.0 MIR30B-201 miRNA transverse colon (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 262.00 93.57 1.26 100.0 MIR181D-201 miRNA transverse colon (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 5900.00 93.93 28.29 100.0 MIR215-201 miRNA transverse colon (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 221.00 0.36 1.06 100.0 MIR181A2-201 miRNA transverse colon (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 62527.00 98.87 299.77 99.58 MIR191-201 miRNA transverse colon (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 10.00 55.56 0.05 58.82 MIR149-201 miRNA transverse colon (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 8.00 1.81 0.04 100.0 MIR181C-201 miRNA transverse colon (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 416.00 93.91 1.99 98.11 MIR181C-201 miRNA transverse colon (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 5198.00 85.68 24.92 100.0 MIR194-1-201 miRNA transverse colon (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 168.00 81.55 0.81 83.58 MIR128-2-201 miRNA transverse colon (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 225.00 76.27 1.08 83.96 MIR99A-201 miRNA transverse colon (Tissue)