ENCFF073SVL

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR316SXP
Description: Part of ENCODE experiment ENCSR316SXP. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2052.00 53.23 9.84 75.22 SNORD117-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 366.00 9.07 1.75 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 3265.00 80.88 15.65 94.67 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 36.00 0.89 0.17 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 35.00 3.86 0.17 100.0 RNA5SP298-201 rRNA pseudogene transverse colon (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 63.00 58.88 0.30 100.0 SNORD115-38-201 snoRNA transverse colon (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 177.00 51.16 0.85 100.0 SNORD115-10-201 snoRNA transverse colon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1601.00 84.93 7.68 100.0 SNORD113-9-201 snoRNA transverse colon (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 30.00 45.45 0.14 100.0 SNORD115-20-201 snoRNA transverse colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 563.00 1.36 2.70 100.0 SNORD38A-201 snoRNA transverse colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 38025.00 91.87 182.30 100.0 SNORD38A-201 snoRNA transverse colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1347.00 3.25 6.46 100.0 SNORD38A-201 snoRNA transverse colon (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 4651.00 86.59 22.30 96.45 SNORD114-20-201 snoRNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 299.00 4.45 1.43 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 251.00 3.73 1.20 52.62 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 16.00 0.24 0.08 27.12 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 83.00 1.23 0.40 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 517.00 7.69 2.48 69.4 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 592.00 8.80 2.84 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 152.00 2.26 0.73 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 1157.00 17.20 5.55 83.54 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 97.00 1.44 0.47 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 836.00 65.83 4.01 100.0 SNORD14C-201 snoRNA transverse colon (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 117.00 78.00 0.56 100.0 SNORD115-44-201 snoRNA transverse colon (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 89.00 22.59 0.43 100.0 RNA5SP77-201 rRNA pseudogene transverse colon (Tissue)