ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 280.00 15.89 11.99 71.07 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 101.00 5.73 4.32 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 441.00 25.73 18.88 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 357.00 20.83 15.28 64.67 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 293.00 18.88 12.54 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 1.00 0.06 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 6.00 0.38 0.26 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 23.00 1.45 0.98 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 803.00 50.57 34.38 91.67 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 244.00 15.37 10.45 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 235.00 16.69 10.06 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 364.00 31.96 15.58 63.86 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 64.00 5.57 2.74 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 35.00 26.92 1.50 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 11.00 8.46 0.47 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 1.00 0.77 0.04 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 33.00 0.20 1.41 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 138.00 49.64 5.91 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 3.00 4.84 0.13 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 7.00 11.29 0.30 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 3.00 4.84 0.13 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 80.00 12.20 3.43 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 16.00 2.44 0.69 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 2.00 5.71 0.09 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 223.00 79.93 9.55 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA GM23248 (Cell line)