ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 124.00 7.05 5.31 34.73 ENST00000747675 lncRNA GM23248 (Cell line)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 81.00 4.60 3.47 100.0 ENST00000747675 lncRNA GM23248 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 709.00 43.96 30.35 96.2 SNHG26-250 lncRNA GM23248 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 533.00 33.04 22.82 92.06 SNHG26-250 lncRNA GM23248 (Cell line)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 8.00 3.51 0.34 100.0 LINC02422-207 lncRNA GM23248 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 12.00 3.66 0.51 100.0 ENST00000753088 lncRNA GM23248 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 14.00 4.27 0.60 100.0 ENST00000753088 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 200.91 6.79 8.60 17.42 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 104.68 3.54 4.48 55.98 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 123.00 4.15 5.27 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 157.00 5.30 6.72 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 32.00 1.08 1.37 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 1027.71 34.71 44.00 86.43 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 54.69 1.85 2.34 23.17 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 45.26 1.53 1.94 38.36 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 11.00 0.37 0.47 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 295.56 9.98 12.65 91.22 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 210.00 94.59 8.99 100.0 ENST00000756452 lncRNA GM23248 (Cell line)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 7.00 4.17 0.30 100.0 ENST00000760093 lncRNA GM23248 (Cell line)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 4.00 2.38 0.17 100.0 ENST00000760093 lncRNA GM23248 (Cell line)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 4.00 7.69 0.17 100.0 SNHG14-356 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 435.00 22.59 18.62 89.14 LINC02806-241 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 170.00 8.83 7.28 100.0 LINC02806-241 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 12.00 0.62 0.51 100.0 LINC02806-241 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 197.00 10.23 8.43 59.88 LINC02806-241 lncRNA GM23248 (Cell line)