ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 5.00 19.23 0.21 100.0 MIR425-201 miRNA GM23248 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 129.00 70.49 5.52 100.0 MIR210-201 miRNA GM23248 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 26.00 89.66 1.11 92.86 MIR378A-201 miRNA GM23248 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 48.00 71.64 2.06 100.0 MIR361-201 miRNA GM23248 (Cell line)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 7.00 3.59 0.30 23.33 MIR101-2-201 miRNA GM23248 (Cell line)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 149.00 76.41 6.38 86.63 MIR101-2-201 miRNA GM23248 (Cell line)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 4.00 44.44 0.17 100.0 MIR323A-201 miRNA GM23248 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 8476.00 98.79 362.89 99.44 MIR26A1-201 miRNA GM23248 (Cell line)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 8.00 53.33 0.34 100.0 MIR129-2-201 miRNA GM23248 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 9.00 75.00 0.39 100.0 MIR342-201 miRNA GM23248 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 2167.00 86.13 92.78 86.96 MIR148A-201 miRNA GM23248 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 10.00 0.40 0.43 100.0 MIR148A-201 miRNA GM23248 (Cell line)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 296.00 98.34 12.67 100.0 MIR410-201 miRNA GM23248 (Cell line)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 2.00 0.37 0.09 100.0 MIR409-201 miRNA GM23248 (Cell line)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 515.00 94.32 22.05 100.0 MIR409-201 miRNA GM23248 (Cell line)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 1126.00 99.91 48.21 100.0 MIR411-201 miRNA GM23248 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 468.00 95.71 20.04 97.5 MIR26B-201 miRNA GM23248 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 207.00 81.50 8.86 92.41 MIR148B-201 miRNA GM23248 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 394.00 95.17 16.87 99.49 MIRLET7G-201 miRNA GM23248 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 128.00 90.78 5.48 98.46 MIR30D-201 miRNA GM23248 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 5.00 3.55 0.21 71.43 MIR30D-201 miRNA GM23248 (Cell line)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 12.00 100.00 0.51 100.0 MIR126-201 miRNA GM23248 (Cell line)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 10.00 37.04 0.43 100.0 MIR374A-201 miRNA GM23248 (Cell line)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 2243.00 83.57 96.03 100.0 MIR31-201 miRNA GM23248 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 445.00 13.44 19.05 100.0 RNA5S12-201 rRNA GM23248 (Cell line)