ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 130.00 0.02 0.49 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 83.00 0.01 0.31 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 16487.00 16.83 61.57 100.0 SNHG14-315 lncRNA prostate gland (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 40742.00 41.59 152.15 84.16 SNHG14-315 lncRNA prostate gland (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 17744.00 18.11 66.27 73.41 SNHG14-315 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 85.00 0.01 0.32 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1017.00 0.09 3.80 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 799417.14 69.72 2985.50 75.19 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 182.00 0.02 0.68 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 29.00 0.00 0.11 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 266429.29 23.24 995.01 24.26 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 25289.00 2.21 94.44 93.21 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 184.00 0.02 0.69 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2050.00 0.18 7.66 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 8704.00 0.76 32.51 99.52 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 830.00 16.53 3.10 52.37 SNHG14-323 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 489.00 0.68 1.83 46.44 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 802.00 1.11 3.00 87.27 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 67987.00 94.04 253.90 98.3 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 640.00 0.89 2.39 59.04 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 19684.00 34.07 73.51 61.23 SNHG14-336 lncRNA prostate gland (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 36426.00 63.04 136.04 89.47 SNHG14-336 lncRNA prostate gland (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 15213.00 76.97 56.81 93.1 SNHG14-341 lncRNA prostate gland (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 4092.00 36.54 15.28 100.0 NCL-211 retained intron prostate gland (Tissue)