ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 35.00 0.09 0.13 100.0 RPL4-202 retained intron prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 540.00 1.35 2.02 100.0 RPL4-202 retained intron prostate gland (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 2362.00 35.85 8.82 100.0 RPL4-207 retained intron prostate gland (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 1559.00 23.66 5.82 100.0 RPL4-207 retained intron prostate gland (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 94768.00 90.76 353.92 96.86 ENST00000565336 lncRNA prostate gland (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 2509.00 2.40 9.37 77.92 ENST00000565336 lncRNA prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3926.00 0.39 14.66 100.0 RBMX-210 retained intron prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 1218.00 0.12 4.55 100.0 RBMX-210 retained intron prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 7290.00 0.72 27.23 100.0 RBMX-210 retained intron prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 508331.00 50.54 1898.41 51.71 RBMX-210 retained intron prostate gland (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 290.00 14.24 1.08 100.0 RPL4-214 retained intron prostate gland (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 552.00 27.10 2.06 100.0 RPL4-214 retained intron prostate gland (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 3006.32 8.71 11.23 10.41 POLG-DT-202 lncRNA prostate gland (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 25462.44 73.73 95.09 85.58 POLG-DT-202 lncRNA prostate gland (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 34.00 0.10 0.13 100.0 POLG-DT-202 lncRNA prostate gland (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2176.00 38.34 8.13 100.0 ENST00000570843 lncRNA prostate gland (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 4410.00 90.82 16.47 100.0 MIR497HG-207 lncRNA prostate gland (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 20339.00 96.61 75.96 98.97 MIR22HG-212 lncRNA prostate gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 44.00 0.19 0.16 19.05 SNORD53B-201 snoRNA prostate gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 187.00 0.81 0.70 80.95 SNORD53B-201 snoRNA prostate gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 21760.00 94.08 81.26 96.1 SNORD53B-201 snoRNA prostate gland (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 186.00 55.03 0.69 100.0 ENST00000578036 lncRNA prostate gland (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 507.00 93.37 1.89 100.0 RPL23A-207 protein coding prostate gland (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 263.00 79.94 0.98 100.0 MIR744-201 miRNA prostate gland (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 191.00 71.27 0.71 100.0 MIR378C-201 miRNA prostate gland (Tissue)