ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 736.00 4.31 2.75 100.0 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 74.00 0.43 0.28 100.0 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 2686.00 15.73 10.03 72.2 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 234.00 1.37 0.87 65.36 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 324.00 1.90 1.21 100.0 WDR74-204 protein coding prostate gland (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 3939.00 83.19 14.71 100.0 HSPA8-211 retained intron prostate gland (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 85.00 11.05 0.32 100.0 SCARNA9-201 lncRNA prostate gland (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 29012.00 94.00 108.35 100.0 TAF1D-215 retained intron prostate gland (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 109.00 0.35 0.41 100.0 TAF1D-215 retained intron prostate gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 7794.00 96.81 29.11 100.0 HSPA8-215 retained intron prostate gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 5.00 0.06 0.02 100.0 HSPA8-215 retained intron prostate gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 9.00 0.11 0.03 100.0 HSPA8-215 retained intron prostate gland (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 106.00 10.12 0.40 100.0 RPS2-215 retained intron prostate gland (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 177211.00 75.20 661.81 77.48 ENST00000548801 lncRNA prostate gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 599.00 14.10 2.24 100.0 ENST00000554988 lncRNA prostate gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 740.00 17.42 2.76 100.0 ENST00000554988 lncRNA prostate gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 853.00 20.08 3.19 100.0 ENST00000554988 lncRNA prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 70049.00 84.26 261.60 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 9881.00 11.89 36.90 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 741.00 0.89 2.77 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 296.00 0.36 1.11 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 634.00 96.79 2.37 100.0 TEKT4P2-201 transcribed unprocessed pseudogene prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1.00 0.00 0.00 100.0 RPL4-202 retained intron prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 478.00 1.20 1.79 100.0 RPL4-202 retained intron prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 34940.00 87.60 130.49 95.7 RPL4-202 retained intron prostate gland (Tissue)