ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 28.00 62.22 0.10 100.0 MIR196A1-201 miRNA prostate gland (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 32.00 0.67 0.12 100.0 MT-RNR1-201 Mt rRNA prostate gland (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 483.00 10.05 1.80 100.0 MT-RNR1-201 Mt rRNA prostate gland (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 211.00 86.48 0.79 100.0 MIR454-201 miRNA prostate gland (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 267.00 64.81 1.00 100.0 MIR501-201 miRNA prostate gland (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 650.00 86.09 2.43 100.0 MIR769-201 miRNA prostate gland (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 102.00 71.83 0.38 100.0 KRTAP19-1-201 protein coding prostate gland (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 23.00 60.53 0.09 100.0 MIR708-201 miRNA prostate gland (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 4.00 100.00 0.01 100.0 MIR509-3-201 miRNA prostate gland (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 5.00 100.00 0.02 100.0 MIR301B-201 miRNA prostate gland (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 63.00 24.90 0.24 68.48 RNU1-82P-201 snRNA prostate gland (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 2509.00 25.60 9.37 68.42 SNORD66-201 snoRNA prostate gland (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 255.00 2.60 0.95 100.0 SNORD66-201 snoRNA prostate gland (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 218.00 2.22 0.81 100.0 SNORD66-201 snoRNA prostate gland (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 2510.00 25.61 9.37 100.0 SNORD66-201 snoRNA prostate gland (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 78.00 46.15 0.29 100.0 U3.17-201 snoRNA prostate gland (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2236.00 95.80 8.35 100.0 SNORD17-201 snoRNA prostate gland (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 127.00 44.72 0.47 100.0 SNORD72-201 snoRNA prostate gland (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1092.00 62.79 4.08 100.0 SNORD70B-201 snoRNA prostate gland (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 7768.00 50.74 29.01 97.8 RNY4P18-201 misc RNA prostate gland (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 15376.00 89.25 57.42 100.0 SNORD90-201 snoRNA prostate gland (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 906.00 5.26 3.38 58.11 SNORD90-201 snoRNA prostate gland (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 7911.00 18.18 29.54 100.0 SNORD69-201 snoRNA prostate gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 2297.00 5.28 8.58 100.0 SNORD69-201 snoRNA prostate gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 570.00 1.31 2.13 100.0 SNORD69-201 snoRNA prostate gland (Tissue)