ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 883.00 0.64 4.98 100.0 MIR17HG-214 lncRNA spleen (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 66.00 0.05 0.37 100.0 MIR17HG-214 lncRNA spleen (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 92.00 0.07 0.52 100.0 MIR17HG-214 lncRNA spleen (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 15222.00 2.81 85.79 100.0 SNHG32-223 lncRNA spleen (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 849.00 0.16 4.78 100.0 SNHG32-223 lncRNA spleen (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 23.00 0.00 0.13 100.0 SNHG32-223 lncRNA spleen (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 5608.00 1.03 31.60 81.81 SNHG32-223 lncRNA spleen (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 516066.00 95.22 2908.39 100.0 SNHG32-223 lncRNA spleen (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 29282.00 88.42 165.02 99.06 SNHG32-227 lncRNA spleen (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1795.00 5.42 10.12 100.0 SNHG32-227 lncRNA spleen (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 68.00 0.21 0.38 100.0 SNHG32-227 lncRNA spleen (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 6452.00 84.96 36.36 100.0 B4GALT1-203 nonsense mediated decay spleen (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 209.00 2.23 1.18 100.0 ENST00000722183 lncRNA spleen (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 2298.00 24.47 12.95 91.7 ENST00000722183 lncRNA spleen (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 553.00 5.89 3.12 100.0 ENST00000722183 lncRNA spleen (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 6.00 17.65 0.03 100.0 MIR34BHG-202 lncRNA spleen (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 5949.00 67.83 33.53 75.49 THBS3-AS1-228 lncRNA spleen (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 45.00 75.00 0.25 100.0 MIR200CHG-202 lncRNA spleen (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 6.00 10.00 0.03 100.0 MIR200CHG-202 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 4457.00 38.34 25.12 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 248.00 2.13 1.40 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 1477.00 12.70 8.32 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 20.00 57.14 0.11 100.0 MEG8-261 lncRNA spleen (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 79.00 22.70 0.45 100.0 NR2F2-AS1-327 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 1479.00 9.46 8.34 49.65 ENST00000747675 lncRNA spleen (Tissue)