ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 892.00 0.08 5.03 89.56 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 58.00 0.00 0.33 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 26.00 0.00 0.15 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 7534.00 0.64 42.46 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2069.00 0.18 11.66 84.73 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 415.28 0.04 2.34 39.1 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 3804.00 0.32 21.44 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2334.00 0.20 13.15 66.42 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 6679.00 0.57 37.64 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 89.00 0.01 0.50 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 16.00 0.00 0.09 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 9466.00 14.53 53.35 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 14391.16 22.09 81.10 90.88 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 401.00 0.62 2.26 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 316.00 0.48 1.78 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 263.17 0.40 1.48 1.66 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 17493.00 26.85 98.59 99.94 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 1613.00 2.48 9.09 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 5379.00 8.26 30.31 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 195.00 0.30 1.10 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1244.00 1.12 7.01 62.83 MEG8-251 lncRNA spleen (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 104001.00 94.01 586.12 97.97 MEG8-251 lncRNA spleen (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 865.00 0.78 4.87 41.67 MEG8-251 lncRNA spleen (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 301.00 0.27 1.70 92.05 MEG8-251 lncRNA spleen (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 20.00 0.02 0.11 100.0 MEG8-251 lncRNA spleen (Tissue)