ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 14769.00 2.74 83.23 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 214.00 0.04 1.21 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 620.00 0.12 3.49 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 3808.00 0.71 21.46 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 92343.00 17.14 520.42 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 49.00 6.83 0.28 100.0 FTX-219 lncRNA spleen (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 526.00 73.36 2.96 95.64 FTX-219 lncRNA spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 178.00 0.47 1.00 60.14 CTC1-214 protein coding spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 262.00 0.69 1.48 76.38 CTC1-214 protein coding spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 21312.00 56.32 120.11 82.88 CTC1-214 protein coding spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 118.00 0.31 0.67 39.86 CTC1-214 protein coding spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 9056.00 23.93 51.04 52.03 CTC1-214 protein coding spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 1078.00 2.85 6.08 100.0 CTC1-214 protein coding spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 3151.00 8.33 17.76 100.0 CTC1-214 protein coding spleen (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 282.00 0.75 1.59 100.0 CTC1-214 protein coding spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 930.00 2.96 5.24 81.22 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 2161.00 6.87 12.18 95.2 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 75.00 0.24 0.42 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 2155.00 6.85 12.14 54.46 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 44.00 0.14 0.25 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 50.00 0.16 0.28 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 37.00 0.12 0.21 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 8441.00 26.85 47.57 74.42 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 83.00 0.26 0.47 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 6873.00 21.86 38.73 70.11 ENST00000651540 lncRNA spleen (Tissue)