ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 1779.00 11.30 10.03 100.0 NSRP1-214 protein coding spleen (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 8698.00 55.27 49.02 69.04 NSRP1-214 protein coding spleen (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 1137.00 23.07 6.41 92.29 MIR23AHG-201 lncRNA spleen (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 1363.00 27.65 7.68 82.91 MIR23AHG-201 lncRNA spleen (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 772.00 15.66 4.35 93.35 MIR23AHG-201 lncRNA spleen (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 225.00 4.56 1.27 59.52 MIR23AHG-201 lncRNA spleen (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 24.00 25.81 0.14 100.0 ODAD3-204 nonsense mediated decay spleen (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 1246.00 2.11 7.02 100.0 VMP1-217 retained intron spleen (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 197.00 0.33 1.11 100.0 VMP1-217 retained intron spleen (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 40487.00 68.72 228.17 75.58 VMP1-217 retained intron spleen (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 2580.00 41.39 14.54 100.0 C19orf48P-203 retained intron spleen (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 104.00 1.67 0.59 100.0 C19orf48P-203 retained intron spleen (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 467042.00 80.71 2632.10 82.26 CARMN-209 lncRNA spleen (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 755.00 51.96 4.25 100.0 PPFIA1P1-201 processed pseudogene spleen (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 860.00 40.59 4.85 100.0 SNORD114-21-201 snoRNA spleen (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 730.00 34.45 4.11 100.0 SNORD114-21-201 snoRNA spleen (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 5862.00 96.00 33.04 100.0 MIR98-201 miRNA spleen (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 98.00 48.04 0.55 100.0 SNORD113-5-201 snoRNA spleen (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 1501.00 90.53 8.46 100.0 MIR15A-201 miRNA spleen (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 22.00 84.62 0.12 100.0 MIR376C-201 miRNA spleen (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 890.00 41.90 5.02 100.0 SNHG21-206 retained intron spleen (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 663489.00 48.32 3739.22 97.55 MIR486-1-201 miRNA spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 7936.00 49.06 44.72 100.0 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 571.00 3.53 3.22 100.0 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 986.00 6.10 5.56 100.0 NOP56-219 retained intron spleen (Tissue)