ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 1217.00 81.51 6.86 100.0 RPL23A-207 protein coding spleen (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 802.00 97.33 4.52 100.0 MIR744-201 miRNA spleen (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 49.00 64.47 0.28 100.0 MIR378C-201 miRNA spleen (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 29579.00 82.67 166.70 89.82 MIR142HG-201 lncRNA spleen (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 56.00 0.16 0.32 100.0 MIR142HG-201 lncRNA spleen (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 697.00 1.95 3.93 9.37 MIR142HG-201 lncRNA spleen (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 335.87 0.05 1.89 52.89 RPL23A-208 retained intron spleen (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 332.68 0.05 1.87 60.05 RPL23A-208 retained intron spleen (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 631347.00 86.78 3558.07 91.25 RPL23A-208 retained intron spleen (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 91123.00 12.53 513.54 89.29 RPL23A-208 retained intron spleen (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 4070.00 4.98 22.94 75.74 RPL17-211 retained intron spleen (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 9987.00 12.21 56.28 48.9 RPL17-211 retained intron spleen (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 1322.00 1.62 7.45 100.0 RPL17-211 retained intron spleen (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 56357.00 68.93 317.61 96.56 RPL17-211 retained intron spleen (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 5740.00 7.02 32.35 91.36 RPL17-211 retained intron spleen (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 439.00 16.05 2.47 25.6 ENST00000582320 lncRNA spleen (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 473.00 17.29 2.67 100.0 ENST00000582320 lncRNA spleen (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 20.00 0.73 0.11 100.0 ENST00000582320 lncRNA spleen (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 7523.00 12.31 42.40 100.0 RPL17-214 retained intron spleen (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 33431.34 54.71 188.41 66.95 RPL17-214 retained intron spleen (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 16444.92 26.91 92.68 32.23 RPL17-214 retained intron spleen (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 647106.00 98.39 3646.89 99.92 SNORD43-201 snoRNA spleen (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 186.00 0.03 1.05 100.0 SNORD43-201 snoRNA spleen (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 100.00 26.11 0.56 100.0 MIR151B-201 miRNA spleen (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 69.00 0.60 0.39 100.0 SNORD3A-201 snoRNA spleen (Tissue)