ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 15118.00 82.30 85.20 96.64 NOP56-217 protein coding CDS not defined spleen (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 1815.00 5.45 10.23 66.27 RABGGTB-213 protein coding CDS not defined spleen (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 7116.00 21.37 40.10 100.0 RABGGTB-213 protein coding CDS not defined spleen (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 11410.00 34.26 64.30 100.0 RABGGTB-213 protein coding CDS not defined spleen (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 924.00 2.77 5.21 33.73 RABGGTB-213 protein coding CDS not defined spleen (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 1201.00 3.61 6.77 75.39 RABGGTB-213 protein coding CDS not defined spleen (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 193.00 0.58 1.09 100.0 RABGGTB-213 protein coding CDS not defined spleen (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 5949.00 82.99 33.53 100.0 GNL3-211 retained intron spleen (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 819.00 11.43 4.62 100.0 GNL3-211 retained intron spleen (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 348.00 69.74 1.96 100.0 RPL5-205 retained intron spleen (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 88.00 0.87 0.50 100.0 ZBED9-AS1-201 lncRNA spleen (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 3650.00 90.66 20.57 100.0 RPS3A-206 retained intron spleen (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 31040.00 97.68 174.93 100.0 COX7C-203 protein coding spleen (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 4371.00 3.48 24.63 100.0 RACK1-229 protein coding spleen (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 73794.71 58.74 415.88 85.13 RACK1-229 protein coding spleen (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 25140.00 20.01 141.68 99.82 RACK1-229 protein coding spleen (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 12685.29 10.10 71.49 18.65 RACK1-229 protein coding spleen (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 673.00 8.36 3.79 98.25 RACK1-230 retained intron spleen (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 31.00 0.38 0.17 51.67 RACK1-230 retained intron spleen (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 431.00 3.02 2.43 100.0 RNA5SP486-201 rRNA pseudogene spleen (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 7695.00 89.60 43.37 100.0 SCARNA5-201 scaRNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1076.00 0.54 6.06 100.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 5492.00 2.77 30.95 75.44 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 561.00 0.28 3.16 100.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 386.00 0.19 2.18 57.87 RNY4-201 misc RNA spleen (Tissue)