ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 34.00 6.15 0.04 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 48.00 4.92 0.06 87.27 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 117.00 11.99 0.14 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 7.00 0.72 0.01 12.73 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1330.00 11.08 1.60 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 298.00 2.48 0.36 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 11.00 2.24 0.01 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1086.00 54.79 1.30 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 6.00 1.01 0.01 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1571.00 1.25 1.89 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 571.00 0.46 0.69 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 475.00 0.38 0.57 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 587.00 0.47 0.70 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 64.00 0.05 0.08 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 7426.00 5.93 8.91 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 50.00 0.12 0.06 62.5 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 127.00 0.30 0.15 65.13 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1423.00 3.35 1.71 96.8 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 113484.00 42.66 136.19 89.98 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 166.00 86.46 0.20 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 6.00 3.06 0.01 31.58 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 24.00 68.57 0.03 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 34.00 0.11 0.04 16.75 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 169.00 0.53 0.20 83.25 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 15271.00 48.14 18.33 90.79 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA GM23338 (Cell line)