ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 1.00 50.00 0.00 100.0 ENST00000784740 lncRNA GM23338 (Cell line)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 3784.00 25.69 4.54 100.0 ENST00000785178 lncRNA GM23338 (Cell line)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 18907.00 39.83 22.69 69.27 ENST00000786284 lncRNA GM23338 (Cell line)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 5339.00 11.25 6.41 100.0 ENST00000786284 lncRNA GM23338 (Cell line)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 8388.00 17.67 10.07 39.74 ENST00000786284 lncRNA GM23338 (Cell line)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 14279.00 77.20 17.14 91.27 ENST00000788343 lncRNA GM23338 (Cell line)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3311.79 16.38 3.97 35.65 ENST00000797550 lncRNA GM23338 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2013.98 9.96 2.42 21.68 ENST00000797550 lncRNA GM23338 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 4507.00 22.30 5.41 95.59 ENST00000797550 lncRNA GM23338 (Cell line)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 1044.00 71.60 1.25 95.34 MIR181A1HG-212 lncRNA GM23338 (Cell line)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 12.00 0.82 0.01 100.0 MIR181A1HG-212 lncRNA GM23338 (Cell line)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 5269.00 51.88 6.32 100.0 C19orf48P-218 lncRNA GM23338 (Cell line)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 2776.00 27.33 3.33 100.0 C19orf48P-218 lncRNA GM23338 (Cell line)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1325.00 19.79 1.59 72.25 SNHG18-220 lncRNA GM23338 (Cell line)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 387.00 19.79 0.46 100.0 ENST00000817026 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 618.00 1.70 0.74 100.0 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 179.00 0.49 0.21 100.0 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 1401.96 3.86 1.68 62.84 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 844.34 2.33 1.01 44.96 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 8560.00 23.59 10.27 98.78 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 763.70 2.10 0.92 23.0 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1033.55 2.85 1.24 40.67 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 1207.00 3.33 1.45 81.22 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 1047.77 2.89 1.26 25.52 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 3575.08 9.85 4.29 71.52 ENST00000823801 lncRNA GM23338 (Cell line)