ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 3643.00 93.05 4.37 100.0 EHBP1-AS1-210 lncRNA GM23338 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 277.00 5.90 0.33 100.0 ENST00000770398 lncRNA GM23338 (Cell line)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 732.00 15.60 0.88 100.0 ENST00000770398 lncRNA GM23338 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 64.00 1.36 0.08 100.0 ENST00000770398 lncRNA GM23338 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 140.00 3.55 0.17 100.0 ENST00000771298 lncRNA GM23338 (Cell line)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 1.00 0.03 0.00 100.0 ENST00000771298 lncRNA GM23338 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 432.00 10.94 0.52 69.57 ENST00000771298 lncRNA GM23338 (Cell line)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 238.00 6.03 0.29 100.0 ENST00000771298 lncRNA GM23338 (Cell line)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 2642.00 41.57 3.17 100.0 ENST00000772672 lncRNA GM23338 (Cell line)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 5.00 0.08 0.01 100.0 ENST00000772672 lncRNA GM23338 (Cell line)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 76.00 1.20 0.09 100.0 ENST00000772672 lncRNA GM23338 (Cell line)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 959.00 36.46 1.15 100.0 ENST00000773843 lncRNA GM23338 (Cell line)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 1728.00 0.20 2.07 100.0 SNHG12-223 lncRNA GM23338 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 47914.00 5.55 57.50 58.65 SNHG12-223 lncRNA GM23338 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 805174.00 93.23 966.25 99.56 SNHG12-223 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 513.00 0.03 0.62 100.0 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1689110.00 93.79 2027.03 95.0 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 169.00 0.01 0.20 100.0 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 844.09 0.05 1.01 50.21 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1535.95 0.09 1.84 65.5 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1186.22 0.07 1.42 33.85 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 4250.00 0.24 5.10 99.09 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 597.00 0.03 0.72 100.0 SNHG25-206 lncRNA GM23338 (Cell line)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 5581.00 21.60 6.70 100.0 ENST00000778783 lncRNA GM23338 (Cell line)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 181.00 88.73 0.22 94.27 MIR155HG-205 lncRNA GM23338 (Cell line)