ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 79166.00 56.65 95.00 100.0 ENST00000747675 lncRNA GM23338 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 9231.00 28.09 11.08 80.6 SNHG26-250 lncRNA GM23338 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 3964.00 12.06 4.76 49.79 SNHG26-250 lncRNA GM23338 (Cell line)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 227.00 8.92 0.27 100.0 LINC02422-207 lncRNA GM23338 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 88.00 1.78 0.11 100.0 ENST00000753088 lncRNA GM23338 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 22.00 0.44 0.03 100.0 ENST00000753088 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 870.29 3.69 1.04 43.47 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 316.00 1.34 0.38 100.0 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 770.00 3.27 0.92 100.0 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 130.00 0.55 0.16 100.0 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 305.38 1.30 0.37 5.02 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 6421.99 27.24 7.71 92.95 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 318.32 1.35 0.38 34.08 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 447.67 1.90 0.54 41.34 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 2742.00 11.63 3.29 100.0 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1465.45 6.22 1.76 87.49 ENST00000756336 lncRNA GM23338 (Cell line)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 67.00 62.62 0.08 100.0 ENST00000756452 lncRNA GM23338 (Cell line)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 154.00 2.62 0.18 100.0 ENST00000760093 lncRNA GM23338 (Cell line)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 3.00 0.05 0.00 100.0 ENST00000760093 lncRNA GM23338 (Cell line)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 176763.00 95.26 212.13 97.9 SNHG14-356 lncRNA GM23338 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 23311.00 2.48 27.97 77.72 LINC02806-241 lncRNA GM23338 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 4010.00 0.43 4.81 100.0 LINC02806-241 lncRNA GM23338 (Cell line)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 115.00 0.01 0.14 100.0 LINC02806-241 lncRNA GM23338 (Cell line)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 873267.00 92.93 1047.97 98.99 LINC02806-241 lncRNA GM23338 (Cell line)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 3.00 0.00 0.00 100.0 LINC02806-241 lncRNA GM23338 (Cell line)