ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 635.00 81.94 0.76 100.0 MIR107-201 miRNA GM23338 (Cell line)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 1.00 100.00 0.00 100.0 MIR381-201 miRNA GM23338 (Cell line)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 16743.00 96.06 20.09 98.86 MIR103A2-201 miRNA GM23338 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 112.00 14.34 0.13 100.0 MIR425-201 miRNA GM23338 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 392.00 50.19 0.47 100.0 MIR425-201 miRNA GM23338 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 146.00 74.87 0.18 100.0 MIR210-201 miRNA GM23338 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 10689.00 97.09 12.83 98.81 MIR378A-201 miRNA GM23338 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 261.00 62.89 0.31 100.0 MIR361-201 miRNA GM23338 (Cell line)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 1486.00 90.17 1.78 93.4 MIR101-2-201 miRNA GM23338 (Cell line)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 19.00 1.15 0.02 15.32 MIR101-2-201 miRNA GM23338 (Cell line)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 1.00 100.00 0.00 100.0 MIR323A-201 miRNA GM23338 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 15476.00 98.69 18.57 99.31 MIR26A1-201 miRNA GM23338 (Cell line)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 90.00 66.67 0.11 100.0 MIR129-2-201 miRNA GM23338 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 240.00 83.62 0.29 100.0 MIR342-201 miRNA GM23338 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 367.00 0.56 0.44 100.0 MIR148A-201 miRNA GM23338 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 61843.00 94.42 74.22 95.5 MIR148A-201 miRNA GM23338 (Cell line)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 4.00 100.00 0.00 100.0 MIR410-201 miRNA GM23338 (Cell line)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 1.00 100.00 0.00 100.0 MIR409-201 miRNA GM23338 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 492.00 94.25 0.59 97.23 MIR26B-201 miRNA GM23338 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 949.00 81.46 1.14 88.28 MIR148B-201 miRNA GM23338 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 9.00 75.00 0.01 100.0 MIRLET7G-201 miRNA GM23338 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 11.00 0.92 0.01 100.0 MIR30D-201 miRNA GM23338 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 1141.00 95.64 1.37 99.13 MIR30D-201 miRNA GM23338 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 5.00 0.42 0.01 33.33 MIR30D-201 miRNA GM23338 (Cell line)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 552.00 89.47 0.66 100.0 MIR126-201 miRNA GM23338 (Cell line)