ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 216.00 98.18 0.26 100.0 MIR548K-201 miRNA GM23338 (Cell line)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 132.00 68.39 0.16 100.0 MIR320B2-201 miRNA GM23338 (Cell line)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 11.00 91.67 0.01 100.0 MIR1271-201 miRNA GM23338 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1092.00 0.98 1.31 100.0 SNORD100-201 snoRNA GM23338 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 92.00 0.08 0.11 100.0 SNORD100-201 snoRNA GM23338 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 107817.00 96.32 129.39 100.0 SNORD100-201 snoRNA GM23338 (Cell line)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 123.00 0.11 0.15 100.0 SNORD100-201 snoRNA GM23338 (Cell line)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 208.00 17.29 0.25 100.0 SNORD111B-201 snoRNA GM23338 (Cell line)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 229.00 6.36 0.27 100.0 RNU2-36P-201 snRNA GM23338 (Cell line)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 92.00 2.56 0.11 100.0 RNU2-36P-201 snRNA GM23338 (Cell line)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 288.00 0.15 0.35 100.0 SNORD19C-201 snoRNA GM23338 (Cell line)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 153957.00 80.24 184.76 85.38 SNORD19C-201 snoRNA GM23338 (Cell line)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 981.00 0.17 1.18 100.0 SNORD12B-201 snoRNA GM23338 (Cell line)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 486528.00 85.71 583.86 90.29 SNORD12B-201 snoRNA GM23338 (Cell line)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 5341.00 0.94 6.41 100.0 SNORD12B-201 snoRNA GM23338 (Cell line)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 1224.00 62.67 1.47 100.0 Y_RNA.609-201 misc RNA GM23338 (Cell line)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 7.00 30.43 0.01 100.0 Y_RNA.612-201 misc RNA GM23338 (Cell line)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 460.00 7.31 0.55 100.0 SNORD71-201 snoRNA GM23338 (Cell line)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 20.00 0.32 0.02 100.0 SNORD71-201 snoRNA GM23338 (Cell line)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 5328.00 84.65 6.39 96.52 SNORD71-201 snoRNA GM23338 (Cell line)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 1333.00 86.67 1.60 92.51 MIR194-2HG-201 lncRNA GM23338 (Cell line)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 175.00 11.38 0.21 49.44 MIR194-2HG-201 lncRNA GM23338 (Cell line)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 364.00 2.13 0.44 100.0 LINC01783-201 lncRNA GM23338 (Cell line)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 264.00 95.31 0.32 100.0 RPS7P15-201 processed pseudogene GM23338 (Cell line)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 30.00 1.12 0.04 100.0 SNORD62B-201 snoRNA GM23338 (Cell line)