ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 7971.00 31.18 23.76 100.0 SNORD115-15-201 snoRNA liver (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 9390.00 30.79 27.99 100.0 SNORD113-3-201 snoRNA liver (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 17835.00 56.46 53.17 100.0 SNORD52-201 snoRNA liver (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2445.00 28.32 7.29 46.31 SNORD117-201 snoRNA liver (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 2835.00 32.84 8.45 66.96 SNORD117-201 snoRNA liver (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 153911.00 83.04 458.81 92.19 SNORD114-3-201 snoRNA liver (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 7064.00 3.81 21.06 100.0 SNORD114-3-201 snoRNA liver (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 2943.00 1.59 8.77 100.0 SNORD114-3-201 snoRNA liver (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 19.00 0.92 0.06 100.0 RNA5SP298-201 rRNA pseudogene liver (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 9142.00 40.77 27.25 100.0 SNORD115-38-201 snoRNA liver (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 11607.00 40.07 34.60 100.0 SNORD115-10-201 snoRNA liver (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 96449.00 84.69 287.51 100.0 SNORD113-9-201 snoRNA liver (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 818.00 20.79 2.44 100.0 SNORD115-20-201 snoRNA liver (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 156.00 0.68 0.47 100.0 SNORD38A-201 snoRNA liver (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 20923.00 90.97 62.37 100.0 SNORD38A-201 snoRNA liver (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 765.00 3.33 2.28 100.0 SNORD38A-201 snoRNA liver (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 204031.00 83.04 608.22 92.3 SNORD114-20-201 snoRNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 2135.00 8.76 6.36 76.88 7SK.1-201 misc RNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 292.00 1.20 0.87 100.0 7SK.1-201 misc RNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 854.00 3.50 2.55 100.0 7SK.1-201 misc RNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 543.00 2.23 1.62 100.0 7SK.1-201 misc RNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 255.00 1.05 0.76 14.71 7SK.1-201 misc RNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 255.00 1.05 0.76 100.0 7SK.1-201 misc RNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 1948.00 7.99 5.81 100.0 7SK.1-201 misc RNA liver (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 1907.00 7.82 5.68 74.81 7SK.1-201 misc RNA liver (Tissue)