ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 2864.00 33.69 8.54 100.0 SNORD115-32-201 snoRNA liver (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 4774.00 39.08 14.23 100.0 SNORD115-30-201 snoRNA liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 159.00 0.95 0.47 100.0 RNY1-201 misc RNA liver (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 1011.00 6.04 3.01 100.0 RNY1-201 misc RNA liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1266.00 7.56 3.77 100.0 RNY1-201 misc RNA liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 3154.86 18.85 9.40 57.39 RNY1-201 misc RNA liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1702.91 10.17 5.08 41.6 RNY1-201 misc RNA liver (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 5161.00 23.66 15.38 100.0 SNORD115-42-201 snoRNA liver (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 676.00 2.51 2.02 100.0 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1372.95 5.09 4.09 42.41 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 277.53 1.03 0.83 18.98 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 19.00 0.07 0.06 100.0 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1032.87 3.83 3.08 70.41 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 178.00 0.66 0.53 100.0 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 202.00 0.75 0.60 100.0 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 13.00 0.05 0.04 100.0 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 1848.00 6.85 5.51 100.0 RNA5SP202-201 rRNA pseudogene liver (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 43190.00 28.08 128.75 100.0 SNORD114-9-201 snoRNA liver (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 84069.00 54.67 250.61 100.0 SNORD114-9-201 snoRNA liver (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 229.00 1.30 0.68 100.0 Y_RNA.234-201 misc RNA liver (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 39.00 0.15 0.12 100.0 RNA5S9-201 rRNA liver (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 2488.00 50.89 7.42 100.0 SNORD115-23-201 snoRNA liver (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 92.00 1.59 0.27 100.0 RNA5SP141-201 rRNA pseudogene liver (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 2470.00 25.90 7.36 100.0 SNORD114-15-201 snoRNA liver (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1897.00 62.14 5.65 100.0 ENST00000364722 snoRNA liver (Tissue)