ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 5433.00 0.15 16.20 100.0 SNHG25-206 lncRNA liver (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 2191881.00 58.57 6533.99 59.55 SNHG25-206 lncRNA liver (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 2497.00 0.07 7.44 100.0 SNHG25-206 lncRNA liver (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 442.07 0.01 1.32 56.31 SNHG25-206 lncRNA liver (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 959.22 0.03 2.86 36.6 SNHG25-206 lncRNA liver (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 604.88 0.02 1.80 18.74 SNHG25-206 lncRNA liver (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 4225.00 0.11 12.59 41.92 SNHG25-206 lncRNA liver (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 633.00 0.02 1.89 100.0 SNHG25-206 lncRNA liver (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 736.00 63.94 2.19 100.0 ENST00000778783 lncRNA liver (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1246.00 87.13 3.71 92.99 MIR155HG-205 lncRNA liver (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 5.00 21.74 0.01 100.0 ENST00000784740 lncRNA liver (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 132.00 1.23 0.39 100.0 ENST00000785178 lncRNA liver (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 378.00 4.63 1.13 80.77 ENST00000786284 lncRNA liver (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1029.00 12.59 3.07 100.0 ENST00000786284 lncRNA liver (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 90.00 1.10 0.27 30.2 ENST00000786284 lncRNA liver (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 804.00 40.08 2.40 90.95 ENST00000788343 lncRNA liver (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 6995.32 29.96 20.85 40.51 ENST00000797550 lncRNA liver (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 4519.92 19.36 13.47 26.17 ENST00000797550 lncRNA liver (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 693.00 2.97 2.07 75.33 ENST00000797550 lncRNA liver (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 186698.00 85.14 556.55 94.36 MIR181A1HG-212 lncRNA liver (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 766.00 0.35 2.28 100.0 MIR181A1HG-212 lncRNA liver (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 419.00 21.96 1.25 100.0 C19orf48P-218 lncRNA liver (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 786.00 41.19 2.34 100.0 C19orf48P-218 lncRNA liver (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 3134.00 86.26 9.34 93.38 SNHG18-220 lncRNA liver (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 250.00 13.46 0.75 100.0 ENST00000817026 lncRNA liver (Tissue)