ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 320.00 0.02 0.95 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1513.00 0.09 4.51 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1078.00 0.07 3.21 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 7872.00 0.48 23.47 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 221.00 0.01 0.66 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 268.00 0.02 0.80 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 38326.00 2.32 114.25 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 535.00 0.03 1.59 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1136.00 0.07 3.39 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 197240.00 11.92 587.97 88.23 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1097.00 0.07 3.27 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 122561.00 7.41 365.35 94.54 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 1476.00 0.09 4.40 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 436.00 0.03 1.30 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 8.00 0.00 0.02 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 98842.00 5.98 294.65 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1047.00 0.06 3.12 78.13 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 332.53 0.02 0.99 52.29 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 303.00 0.02 0.90 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1078.00 0.07 3.21 59.17 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 491.00 0.03 1.46 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 605.00 0.04 1.80 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1769.00 0.11 5.27 100.0 SNHG1-248 lncRNA liver (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 82650.00 32.91 246.38 100.0 SNHG14-315 lncRNA liver (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 48611.00 19.36 144.91 90.6 SNHG14-315 lncRNA liver (Tissue)