ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 47431.00 94.97 141.39 96.28 MIR100-201 miRNA liver (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 2103.00 88.70 6.27 100.0 MIR301A-201 miRNA liver (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 18571.00 47.09 55.36 59.95 MIR130A-201 miRNA liver (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 20402.00 51.73 60.82 72.24 MIR130A-201 miRNA liver (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 115150.00 98.28 343.26 99.35 MIRLET7F2-201 miRNA liver (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 296.00 56.92 0.88 100.0 MIR652-201 miRNA liver (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 19.00 67.86 0.06 100.0 MIR653-201 miRNA liver (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1849.00 60.76 5.51 100.0 MIR140-201 miRNA liver (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1279.00 28.49 3.81 67.49 MIR106B-201 miRNA liver (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 898.00 20.00 2.68 100.0 MIR106B-201 miRNA liver (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 36342.00 22.93 108.34 95.34 SNORD83A-201 snoRNA liver (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 116840.00 73.72 348.30 98.9 SNORD83A-201 snoRNA liver (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 2989.00 82.89 8.91 100.0 SNORD41-201 snoRNA liver (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 95.00 3.34 0.28 57.58 MT-TF-201 Mt tRNA liver (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 19.00 0.67 0.06 33.33 MT-TF-201 Mt tRNA liver (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 54.00 1.90 0.16 100.0 MT-TF-201 Mt tRNA liver (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1328.00 10.67 3.96 100.0 MT-TV-201 Mt tRNA liver (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 456.00 1.38 1.36 100.0 MT-RNR2-201 Mt rRNA liver (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 5916.00 17.96 17.64 85.33 MT-RNR2-201 Mt rRNA liver (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 484.00 1.47 1.44 100.0 MT-RNR2-201 Mt rRNA liver (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 376.00 1.14 1.12 100.0 MT-RNR2-201 Mt rRNA liver (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 4824.00 14.64 14.38 87.85 MT-RNR2-201 Mt rRNA liver (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 292.00 0.89 0.87 100.0 MT-RNR2-201 Mt rRNA liver (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 296.00 0.90 0.88 100.0 MT-RNR2-201 Mt rRNA liver (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 473.00 4.47 1.41 100.0 MT-TI-201 Mt tRNA liver (Tissue)