ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 1123.00 72.36 3.35 100.0 MIR15B-201 miRNA liver (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 429.00 82.82 1.28 100.0 MIR150-201 miRNA liver (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 294.00 38.13 0.88 100.0 MIR542-201 miRNA liver (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 176.00 9.34 0.52 100.0 MIR500A-201 miRNA liver (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 1162.00 61.64 3.46 100.0 MIR500A-201 miRNA liver (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 7082.00 16.62 21.11 81.98 MIR30A-201 miRNA liver (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 31671.00 74.34 94.41 95.31 MIR30A-201 miRNA liver (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 1648.00 3.87 4.91 100.0 MIR30A-201 miRNA liver (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 194.00 0.46 0.58 100.0 MIR30A-201 miRNA liver (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 341339.00 90.12 1017.53 92.48 MIR27B-201 miRNA liver (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 715.00 0.19 2.13 100.0 MIR27B-201 miRNA liver (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 4.00 66.67 0.01 100.0 MIR196A2-201 miRNA liver (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 8.00 66.67 0.02 100.0 MIR577-201 miRNA liver (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 45055.00 83.05 134.31 90.46 MIR654-201 miRNA liver (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 2829.00 89.67 8.43 93.09 MIR204-201 miRNA liver (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 2099.00 90.40 6.26 100.0 MIR152-201 miRNA liver (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 26.00 83.87 0.08 100.0 MIR138-1-201 miRNA liver (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 14949.00 94.48 44.56 100.0 MIR30C1-201 miRNA liver (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 1438.00 89.48 4.29 100.0 MIR660-201 miRNA liver (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 105.00 0.85 0.31 100.0 MIR125B1-201 miRNA liver (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 10289.00 82.96 30.67 95.36 MIR125B1-201 miRNA liver (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 5796.00 42.40 17.28 100.0 MIR493-201 miRNA liver (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 6057.00 44.31 18.06 100.0 MIR493-201 miRNA liver (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 717.63 20.14 2.14 24.76 MIR182-201 miRNA liver (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 2392.48 67.15 7.13 71.44 MIR182-201 miRNA liver (Tissue)