ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 473.00 6.37 1.27 100.0 RNVU1-7-201 snRNA urinary bladder (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 2383.00 49.13 6.42 100.0 SNORD24-201 snoRNA urinary bladder (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 622.00 56.65 1.68 100.0 Y_RNA.389-201 misc RNA urinary bladder (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 328.00 0.58 0.88 100.0 SNORD101-201 snoRNA urinary bladder (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 49134.00 87.36 132.41 98.99 SNORD101-201 snoRNA urinary bladder (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 806.00 1.43 2.17 100.0 SNORD101-201 snoRNA urinary bladder (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 3059.00 5.44 8.24 91.18 SNORD101-201 snoRNA urinary bladder (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 45147.00 96.87 121.67 100.0 SNORD37-201 snoRNA urinary bladder (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 120219.00 85.44 323.99 97.64 SNORD59A-201 snoRNA urinary bladder (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 448.00 16.21 1.21 100.0 SNORA7B-201 snoRNA urinary bladder (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 2157.00 78.10 5.81 100.0 SNORD14D-201 snoRNA urinary bladder (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 347.00 23.95 0.94 100.0 Y_RNA.555-201 misc RNA urinary bladder (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 42302.00 85.90 114.00 87.41 MIR25-201 miRNA urinary bladder (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 142801.00 94.65 384.84 97.18 MIR99B-201 miRNA urinary bladder (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 42616.00 58.78 114.85 74.52 MIR23B-201 miRNA urinary bladder (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 27218.00 37.54 73.35 64.47 MIR23B-201 miRNA urinary bladder (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 6788.00 79.64 18.29 100.0 MIR203A-201 miRNA urinary bladder (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 135358.00 26.91 364.78 100.0 MIR199B-201 miRNA urinary bladder (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 326022.00 64.81 878.62 91.21 MIR199B-201 miRNA urinary bladder (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 14519.00 94.68 39.13 100.0 MIR30B-201 miRNA urinary bladder (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1090.00 93.40 2.94 100.0 MIR181D-201 miRNA urinary bladder (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 26.00 70.27 0.07 100.0 MIR508-201 miRNA urinary bladder (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 469.00 90.37 1.26 100.0 MIR215-201 miRNA urinary bladder (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 4056.00 1.42 10.93 100.0 MIR181A2-201 miRNA urinary bladder (Tissue)
ENST00000384872.3 ENST00000384872.3_53_74_+ 53–74 280.00 74.27 0.75 100.0 MIR206-201 miRNA urinary bladder (Tissue)