ENCFF001RTT
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | urinary bladder (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFP |
| Description: | Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000364722.1 | ENST00000364722.1_2_30_+ | 2–30 | 704.00 | 40.67 | 1.90 | 100.0 | ENST00000364722 | snoRNA | urinary bladder (Tissue) |
| ENST00000364809.1 | ENST00000364809.1_2_81_+ | 2–81 | 420.00 | 42.34 | 1.13 | 100.0 | SNORD115-15-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364830.3 | ENST00000364830.3_3_67_+ | 3–67 | 469.00 | 11.97 | 1.26 | 100.0 | SNORD113-3-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364884.1 | ENST00000364884.1_1_66_+ | 1–66 | 11557.00 | 63.10 | 31.15 | 100.0 | SNORD52-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364915.1 | ENST00000364915.1_2_74_+ | 2–74 | 2897.00 | 29.47 | 7.81 | 47.9 | SNORD117-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364915.1 | ENST00000364915.1_1_76_+ | 1–76 | 3151.00 | 32.06 | 8.49 | 66.66 | SNORD117-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364969.1 | ENST00000364969.1_3_71_+ | 3–71 | 82071.00 | 85.86 | 221.18 | 95.71 | SNORD114-3-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364969.1 | ENST00000364969.1_38_71_+ | 38–71 | 2100.00 | 2.20 | 5.66 | 100.0 | SNORD114-3-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364969.1 | ENST00000364969.1_4_62_+ | 4–62 | 3651.00 | 3.82 | 9.84 | 100.0 | SNORD114-3-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000364991.1 | ENST00000364991.1_17_30_+ | 17–30 | 36.00 | 4.00 | 0.10 | 100.0 | RNA5SP298-201 | rRNA pseudogene | urinary bladder (Tissue) |
| ENST00000365037.1 | ENST00000365037.1_2_82_+ | 2–82 | 366.00 | 43.47 | 0.99 | 100.0 | SNORD115-38-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365073.1 | ENST00000365073.1_2_81_+ | 2–81 | 585.00 | 50.09 | 1.58 | 100.0 | SNORD115-10-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365080.1 | ENST00000365080.1_3_67_+ | 3–67 | 19392.00 | 78.51 | 52.26 | 100.0 | SNORD113-9-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365099.1 | ENST00000365099.1_2_82_+ | 2–82 | 38.00 | 33.63 | 0.10 | 100.0 | SNORD115-20-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365161.1 | ENST00000365161.1_1_68_+ | 1–68 | 35622.00 | 92.65 | 96.00 | 100.0 | SNORD38A-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365161.1 | ENST00000365161.1_1_38_+ | 1–38 | 935.00 | 2.43 | 2.52 | 100.0 | SNORD38A-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365161.1 | ENST00000365161.1_1_41_+ | 1–41 | 211.00 | 0.55 | 0.57 | 100.0 | SNORD38A-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365178.1 | ENST00000365178.1_4_67_+ | 4–67 | 61324.00 | 90.55 | 165.27 | 96.92 | SNORD114-20-201 | snoRNA | urinary bladder (Tissue) |
| ENST00000365328.1 | ENST00000365328.1_273_331_+ | 273–331 | 3077.00 | 9.46 | 8.29 | 74.0 | 7SK.1-201 | misc RNA | urinary bladder (Tissue) |
| ENST00000365328.1 | ENST00000365328.1_260_331_+ | 260–331 | 304.00 | 0.93 | 0.82 | 100.0 | 7SK.1-201 | misc RNA | urinary bladder (Tissue) |
| ENST00000365328.1 | ENST00000365328.1_1_76_+ | 1–76 | 1994.00 | 6.13 | 5.37 | 100.0 | 7SK.1-201 | misc RNA | urinary bladder (Tissue) |
| ENST00000365328.1 | ENST00000365328.1_246_331_+ | 246–331 | 822.00 | 2.53 | 2.22 | 100.0 | 7SK.1-201 | misc RNA | urinary bladder (Tissue) |
| ENST00000365328.1 | ENST00000365328.1_1_63_+ | 1–63 | 891.00 | 2.74 | 2.40 | 71.17 | 7SK.1-201 | misc RNA | urinary bladder (Tissue) |
| ENST00000365328.1 | ENST00000365328.1_282_331_+ | 282–331 | 136.00 | 0.42 | 0.37 | 100.0 | 7SK.1-201 | misc RNA | urinary bladder (Tissue) |
| ENST00000365328.1 | ENST00000365328.1_277_331_+ | 277–331 | 2526.00 | 7.77 | 6.81 | 70.03 | 7SK.1-201 | misc RNA | urinary bladder (Tissue) |