ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 3621.00 58.31 9.76 100.0 MIR200CHG-202 lncRNA urinary bladder (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1336.00 21.51 3.60 100.0 MIR200CHG-202 lncRNA urinary bladder (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 715.00 11.27 1.93 100.0 SNHG16-266 lncRNA urinary bladder (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1605.00 25.30 4.33 100.0 SNHG16-266 lncRNA urinary bladder (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 792.00 12.49 2.13 100.0 SNHG16-266 lncRNA urinary bladder (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 331.00 5.22 0.89 100.0 SNHG16-266 lncRNA urinary bladder (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 1184.00 51.91 3.19 100.0 MEG8-261 lncRNA urinary bladder (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 2030.00 67.20 5.47 100.0 NR2F2-AS1-327 lncRNA urinary bladder (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 27.00 1.09 0.07 32.14 ENST00000747675 lncRNA urinary bladder (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 1029.00 41.44 2.77 100.0 ENST00000747675 lncRNA urinary bladder (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 27.00 1.09 0.07 50.0 ENST00000747675 lncRNA urinary bladder (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 30.00 1.21 0.08 52.63 ENST00000747675 lncRNA urinary bladder (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 194.00 7.81 0.52 100.0 ENST00000747675 lncRNA urinary bladder (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 7911.00 48.40 21.32 94.22 SNHG26-250 lncRNA urinary bladder (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 5612.00 34.33 15.12 94.51 SNHG26-250 lncRNA urinary bladder (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 29.00 1.97 0.08 100.0 LINC02422-207 lncRNA urinary bladder (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 99.00 0.64 0.27 100.0 ENST00000753088 lncRNA urinary bladder (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 4374.00 28.42 11.79 100.0 ENST00000753088 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 3023.52 3.84 8.15 15.62 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 460.00 0.58 1.24 100.0 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 110.00 0.14 0.30 100.0 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 72.00 0.09 0.19 100.0 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 20355.91 25.84 54.86 39.99 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 44030.80 55.89 118.66 66.72 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 59.60 0.08 0.16 18.51 ENST00000756336 lncRNA urinary bladder (Tissue)