ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 2723.00 1.72 7.34 100.0 ENST00000651540 lncRNA urinary bladder (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 27579.00 17.40 74.32 50.55 ENST00000651540 lncRNA urinary bladder (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 13320.00 8.41 35.90 100.0 ENST00000651540 lncRNA urinary bladder (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 54836.00 34.60 147.78 83.32 ENST00000651540 lncRNA urinary bladder (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 25014.00 2.78 67.41 100.0 MIRLET7A1HG-203 lncRNA urinary bladder (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 30016.00 92.31 80.89 100.0 MEG8-225 lncRNA urinary bladder (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 272077.00 77.72 733.24 100.0 SNHG29-232 lncRNA urinary bladder (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 248.00 0.07 0.67 100.0 SNHG29-232 lncRNA urinary bladder (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 691.00 0.20 1.86 100.0 SNHG29-232 lncRNA urinary bladder (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 8179.00 2.34 22.04 100.0 SNHG29-232 lncRNA urinary bladder (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 19895.00 5.68 53.62 100.0 SNHG29-232 lncRNA urinary bladder (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 40056.00 11.44 107.95 100.0 SNHG29-232 lncRNA urinary bladder (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 401.00 0.49 1.08 100.0 SNHG14-234 lncRNA urinary bladder (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 28892.00 35.26 77.86 95.85 SNHG14-234 lncRNA urinary bladder (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 767.00 0.94 2.07 100.0 SNHG14-234 lncRNA urinary bladder (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 4915.00 6.00 13.25 100.0 SNHG14-234 lncRNA urinary bladder (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 11150.00 13.61 30.05 100.0 SNHG14-234 lncRNA urinary bladder (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 9350.00 11.41 25.20 96.44 SNHG14-234 lncRNA urinary bladder (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 746.00 1.96 2.01 35.73 ENST00000655317 lncRNA urinary bladder (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 8621.00 22.64 23.23 100.0 ENST00000655317 lncRNA urinary bladder (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2127.00 5.59 5.73 57.74 ENST00000655317 lncRNA urinary bladder (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 1909.00 5.01 5.14 100.0 ENST00000655317 lncRNA urinary bladder (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 3320.00 6.00 8.95 87.55 LINC01962-202 lncRNA urinary bladder (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 47263.00 85.39 127.37 100.0 LINC01962-202 lncRNA urinary bladder (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 700.00 1.26 1.89 100.0 LINC01962-202 lncRNA urinary bladder (Tissue)