ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 3820.93 31.75 10.30 40.8 MIR93-201 miRNA urinary bladder (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 11191.00 86.24 30.16 94.91 MIR532-201 miRNA urinary bladder (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 1916.00 63.15 5.16 100.0 MIR15B-201 miRNA urinary bladder (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 930.00 87.16 2.51 100.0 MIR150-201 miRNA urinary bladder (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 2711.00 44.74 7.31 100.0 MIR542-201 miRNA urinary bladder (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 1083.00 12.24 2.92 100.0 MIR500A-201 miRNA urinary bladder (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 5425.00 61.33 14.62 100.0 MIR500A-201 miRNA urinary bladder (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 187.00 0.51 0.50 100.0 MIR30A-201 miRNA urinary bladder (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 14839.00 40.40 39.99 85.58 MIR30A-201 miRNA urinary bladder (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 5206.00 14.17 14.03 100.0 MIR30A-201 miRNA urinary bladder (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 13109.00 35.69 35.33 83.98 MIR30A-201 miRNA urinary bladder (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 2170.00 0.35 5.85 100.0 MIR27B-201 miRNA urinary bladder (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 557280.00 89.64 1501.85 92.03 MIR27B-201 miRNA urinary bladder (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 4470.00 90.18 12.05 100.0 MIR196A2-201 miRNA urinary bladder (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 55.00 71.43 0.15 100.0 MIR577-201 miRNA urinary bladder (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 41810.00 81.45 112.68 87.86 MIR654-201 miRNA urinary bladder (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 17022.00 89.85 45.87 93.83 MIR204-201 miRNA urinary bladder (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 21817.00 92.04 58.80 100.0 MIR152-201 miRNA urinary bladder (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 84.00 71.79 0.23 100.0 MIR138-1-201 miRNA urinary bladder (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 22632.00 94.63 60.99 100.0 MIR30C1-201 miRNA urinary bladder (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 6076.00 90.48 16.37 100.0 MIR660-201 miRNA urinary bladder (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 3549.00 2.38 9.56 100.0 MIR125B1-201 miRNA urinary bladder (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 118812.00 79.75 320.19 94.25 MIR125B1-201 miRNA urinary bladder (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 3782.00 30.16 10.19 100.0 MIR493-201 miRNA urinary bladder (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 7269.00 57.97 19.59 100.0 MIR493-201 miRNA urinary bladder (Tissue)