ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 898.00 30.49 1.75 100.0 SNORD115-16-201 snoRNA tongue (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 323.00 30.73 0.63 100.0 SNORD115-32-201 snoRNA tongue (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 456.00 31.82 0.89 100.0 SNORD115-30-201 snoRNA tongue (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 597.28 2.86 1.16 27.03 RNY1-201 misc RNA tongue (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 115.00 0.55 0.22 100.0 RNY1-201 misc RNA tongue (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 4933.00 23.66 9.61 100.0 RNY1-201 misc RNA tongue (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 314.00 1.51 0.61 100.0 RNY1-201 misc RNA tongue (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 2407.31 11.55 4.69 73.64 RNY1-201 misc RNA tongue (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 746.00 26.94 1.45 100.0 SNORD115-42-201 snoRNA tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 3008.42 6.15 5.86 43.38 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 137.00 0.28 0.27 100.0 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1207.00 2.47 2.35 100.0 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 830.00 1.70 1.62 100.0 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 371.00 0.76 0.72 100.0 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 306.32 0.63 0.60 27.35 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 2521.00 5.15 4.91 100.0 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 743.29 1.52 1.45 61.58 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 153.00 0.31 0.30 100.0 RNA5SP202-201 rRNA pseudogene tongue (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 122616.00 40.12 238.99 100.0 SNORD114-9-201 snoRNA tongue (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 128057.00 41.90 249.59 100.0 SNORD114-9-201 snoRNA tongue (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1333.00 8.86 2.60 100.0 Y_RNA.234-201 misc RNA tongue (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 23.00 0.04 0.04 100.0 RNA5S9-201 rRNA tongue (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 205.00 38.32 0.40 100.0 SNORD115-23-201 snoRNA tongue (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 2808.00 9.80 5.47 100.0 RNA5SP141-201 rRNA pseudogene tongue (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 6769.00 25.18 13.19 100.0 SNORD114-15-201 snoRNA tongue (Tissue)