ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 291.00 0.72 0.57 82.44 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 767.00 6.84 1.49 76.24 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 2210.88 19.71 4.31 35.56 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 4925.10 43.91 9.60 72.47 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 38204.00 84.51 74.46 97.39 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 66.00 1.17 0.13 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1711.00 13.23 3.33 81.21 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 87.00 0.03 0.17 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1526.00 1.03 2.97 64.55 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 253.00 29.28 0.49 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 556.00 14.05 1.08 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 266260.00 92.39 518.96 99.7 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 474.00 4.60 0.92 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 1438.00 13.95 2.80 72.88 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 261.00 16.43 0.51 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 113.00 13.85 0.22 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 232.00 2.04 0.45 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 14522.00 81.83 28.30 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 1357.00 84.02 2.64 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 6871.00 40.37 13.39 97.68 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 280.00 1.65 0.55 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 1487.00 0.56 2.90 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 3494.00 52.92 6.81 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 696.00 5.55 1.36 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 225.00 3.12 0.44 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA tongue (Tissue)