ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 310.00 0.09 0.60 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 243.00 9.71 0.47 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 467.00 25.55 0.91 60.89 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 217.00 11.87 0.42 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 300.00 16.41 0.58 39.11 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1906.00 33.04 3.71 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 9.00 0.16 0.02 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 67.00 8.87 0.13 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1204.00 72.49 2.35 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 382.00 23.88 0.74 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 72.00 0.41 0.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 35.00 0.20 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 85.00 0.49 0.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 202.00 1.16 0.39 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 598.00 3.42 1.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 125.00 0.72 0.24 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 560.00 0.16 1.09 65.65 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 842.00 0.24 1.64 67.31 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 8096.00 2.29 15.78 96.24 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 912.00 13.65 1.78 40.46 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 553.00 70.99 1.08 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 60.00 9.95 0.12 82.19 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 91.00 65.94 0.18 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 7196.00 17.85 14.03 66.45 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 62.00 0.15 0.12 17.56 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA tongue (Tissue)