ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 3870.00 2.61 7.54 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 91.00 5.77 0.18 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 164.00 3.74 0.32 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 58.00 0.33 0.11 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 490.00 3.46 0.96 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 533.00 3.76 1.04 58.57 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 386.00 2.72 0.75 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 124.00 0.88 0.24 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1065.00 7.52 2.08 97.44 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 37.00 0.26 0.07 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1804.00 13.94 3.52 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1228.00 9.49 2.39 41.78 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1192.00 9.72 2.32 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 1006.00 2.78 1.96 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 25406.00 70.26 49.52 92.18 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 402.00 1.11 0.78 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 362.00 1.00 0.71 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 6.00 0.02 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 883.00 7.81 1.72 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 1509.00 13.39 2.94 43.29 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 168.00 1.73 0.33 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 525.00 17.78 1.02 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 174.00 5.89 0.34 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 230.00 7.79 0.45 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 2.00 0.07 0.00 25.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)