ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 367.71 0.42 0.72 75.66 RNA5S12-201 rRNA tongue (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 1190.00 27.76 2.32 100.0 Y_RNA.14-201 misc RNA tongue (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 567.00 22.18 1.11 100.0 SNORD115-34-201 snoRNA tongue (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 3139.00 37.91 6.12 100.0 RNU5E-1-201 snRNA tongue (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 694.00 1.91 1.35 69.68 RNA5SP370-201 rRNA pseudogene tongue (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 8.00 2.89 0.02 100.0 SNORA31-201 snoRNA tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 124.00 0.34 0.24 100.0 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 1221.00 3.36 2.38 83.69 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 203.00 0.56 0.40 100.0 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 2476.00 6.82 4.83 58.59 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 12441.00 5.63 24.25 75.56 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 2985.00 1.35 5.82 100.0 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 36747.39 16.62 71.62 35.06 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 6905.00 3.12 13.46 78.91 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 4058.00 1.84 7.91 53.63 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 429.00 0.19 0.84 100.0 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1077.00 0.49 2.10 20.61 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 6191.00 2.80 12.07 32.71 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 1517.75 0.69 2.96 48.82 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 5320.00 2.41 10.37 59.8 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 7059.00 3.19 13.76 100.0 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 72506.83 32.79 141.32 71.94 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 1529.70 0.69 2.98 36.82 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 5587.00 2.53 10.89 92.99 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 5415.00 2.45 10.55 75.7 RNU5A-1-201 snRNA tongue (Tissue)