ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 568.00 17.07 1.11 100.0 ENST00000770398 lncRNA tongue (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 1625.00 48.84 3.17 100.0 ENST00000770398 lncRNA tongue (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 16.00 0.48 0.03 100.0 ENST00000770398 lncRNA tongue (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 148.00 0.48 0.29 100.0 ENST00000771298 lncRNA tongue (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 103.00 0.33 0.20 100.0 ENST00000771298 lncRNA tongue (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 26063.00 84.48 50.80 94.57 ENST00000771298 lncRNA tongue (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 132.00 0.43 0.26 100.0 ENST00000771298 lncRNA tongue (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 1644.00 37.04 3.20 100.0 ENST00000772672 lncRNA tongue (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 6.00 0.14 0.01 100.0 ENST00000772672 lncRNA tongue (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 202.00 4.55 0.39 100.0 ENST00000772672 lncRNA tongue (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 15579.00 84.03 30.36 100.0 ENST00000773843 lncRNA tongue (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 49.00 0.02 0.10 100.0 SNHG12-223 lncRNA tongue (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 148230.00 47.98 288.91 95.5 SNHG12-223 lncRNA tongue (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 155830.00 50.44 303.73 99.2 SNHG12-223 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 2424.00 0.12 4.72 100.0 SNHG25-206 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1668277.00 83.46 3251.61 85.62 SNHG25-206 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1637.00 0.08 3.19 100.0 SNHG25-206 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 717.37 0.04 1.40 58.66 SNHG25-206 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1961.23 0.10 3.82 51.42 SNHG25-206 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1016.20 0.05 1.98 21.18 SNHG25-206 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 4665.00 0.23 9.09 65.78 SNHG25-206 lncRNA tongue (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 1023.00 0.05 1.99 100.0 SNHG25-206 lncRNA tongue (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 452.00 56.22 0.88 100.0 ENST00000778783 lncRNA tongue (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 4438.00 76.88 8.65 82.68 MIR155HG-205 lncRNA tongue (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 22440.00 60.63 43.74 100.0 ENST00000784740 lncRNA tongue (Tissue)