ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 690592.00 41.74 1346.02 99.08 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1205.00 0.07 2.35 65.45 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 167829.00 10.14 327.11 99.51 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 11124.00 0.67 21.68 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 45015.00 2.72 87.74 98.53 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 429.00 0.03 0.84 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1538.00 0.09 3.00 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1490.00 0.09 2.90 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 5355.00 0.32 10.44 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 339.00 0.02 0.66 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 742.00 0.04 1.45 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 20464.00 1.24 39.89 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 203.00 0.01 0.40 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2815.00 0.17 5.49 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 49195.00 2.97 95.89 41.82 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 5732.00 0.35 11.17 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 205196.00 12.40 399.94 95.32 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 6141.00 0.37 11.97 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 2023.00 0.12 3.94 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 6.00 0.00 0.01 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 171000.00 10.34 333.29 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2982.00 0.18 5.81 83.37 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 655.01 0.04 1.28 54.04 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 471.00 0.03 0.92 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 3911.00 0.24 7.62 69.27 SNHG1-248 lncRNA tongue (Tissue)