ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 12673.00 9.72 24.70 100.0 MEG8-234 lncRNA tongue (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 2637.00 74.77 5.14 100.0 SNHG17-252 lncRNA tongue (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 3542.00 28.17 6.90 62.86 SNHG14-288 lncRNA tongue (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 5445.00 43.31 10.61 92.04 SNHG14-288 lncRNA tongue (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 42.00 2.19 0.08 100.0 SNHG14-295 lncRNA tongue (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 33429.00 72.03 65.16 100.0 MEG8-240 lncRNA tongue (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 2897.00 19.97 5.65 100.0 SNHG14-303 lncRNA tongue (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 78.00 1.03 0.15 100.0 SNHG14-306 lncRNA tongue (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 177.00 2.34 0.34 100.0 SNHG14-306 lncRNA tongue (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 5113.00 67.67 9.97 98.38 SNHG14-306 lncRNA tongue (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 247.00 3.27 0.48 100.0 SNHG14-306 lncRNA tongue (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 278.00 0.61 0.54 100.0 ENST00000666735 lncRNA tongue (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 18130.00 39.61 35.34 100.0 ENST00000666735 lncRNA tongue (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 238043.00 79.58 463.97 100.0 MEG8-242 lncRNA tongue (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 5709.67 23.08 11.13 37.36 SNHG14-312 lncRNA tongue (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 10158.74 41.06 19.80 66.47 SNHG14-312 lncRNA tongue (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 1778.00 7.19 3.47 100.0 SNHG14-312 lncRNA tongue (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 9330.00 0.43 18.18 100.0 MEG8-244 lncRNA tongue (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 14785.00 0.69 28.82 100.0 MEG8-244 lncRNA tongue (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 2054531.00 95.78 4004.45 99.94 MEG8-244 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 3223.00 0.19 6.28 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 3.00 0.00 0.01 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 13129.00 0.79 25.59 99.41 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 544.14 0.03 1.06 44.9 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 4752.00 0.29 9.26 90.6 SNHG1-248 lncRNA tongue (Tissue)