ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 20.00 0.02 0.04 100.0 VMP1-217 retained intron tongue (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 62002.00 52.71 120.85 57.75 VMP1-217 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 579.00 0.05 1.13 100.0 C19orf48P-203 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 876847.21 80.28 1709.05 86.87 C19orf48P-203 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 204087.72 18.68 397.78 19.02 C19orf48P-203 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 1469.00 0.13 2.86 89.08 C19orf48P-203 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 181.00 0.02 0.35 100.0 C19orf48P-203 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 13.00 0.00 0.03 100.0 C19orf48P-203 retained intron tongue (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 37.00 63.79 0.07 100.0 ENST00000597420 lncRNA tongue (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 209.00 5.26 0.41 100.0 RPS11-206 retained intron tongue (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 3199.00 80.52 6.24 100.0 RPS11-206 retained intron tongue (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 557675.00 57.11 1086.95 59.15 CARMN-209 lncRNA tongue (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1490.00 17.66 2.90 100.0 ENST00000602478 lncRNA tongue (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 3.00 27.27 0.01 100.0 PPFIA1P1-201 processed pseudogene tongue (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 65043.00 52.74 126.77 100.0 SNORD114-21-201 snoRNA tongue (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 18018.00 14.61 35.12 100.0 SNORD114-21-201 snoRNA tongue (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 879.00 30.94 1.71 100.0 SNORD115-40-201 snoRNA tongue (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 63580.00 97.64 123.92 100.0 MIR98-201 miRNA tongue (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 775571.00 96.78 1511.65 100.0 SNORD113-5-201 snoRNA tongue (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 4313.00 91.53 8.41 100.0 MIR15A-201 miRNA tongue (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 33266.00 83.49 64.84 100.0 MIR376C-201 miRNA tongue (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 6366.00 62.33 12.41 100.0 SNHG21-206 retained intron tongue (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 41.00 2.53 0.08 100.0 SNORD11B-201 snoRNA tongue (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 3756.00 63.72 7.32 100.0 SNORD91B-201 snoRNA tongue (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 1.00 3.57 0.00 100.0 MIR219A2HG-201 lncRNA tongue (Tissue)